Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFNKKKTIASLIVLSSLASQIALTPISALADTHDTNNIALLQNTNENVPYKYTSTLTFPTLTNQTQEDYKLEIKLALPSGMNYTDLQVSVGGEDITNQVGTTSFDNSTNTVTFKFDKVTSWDSLSKAKVKFDWKTSYSGEGGEAKIDSLVATATATSEDKAGNKSTSTGSLKPKDISAPVVKAEETEITYSPGSDVTEEQFLTDIHASVTDNYDSTISLTSNFTSAVNLAVSGDYSVNVQATDKAGNVSNTLNVT----VHVSTPAPVAGANITVNHLDSNGNKIAESDTLTGVV------NSNYQSESKKITGYTLETTPTNATG-TFTDTPQTVDYIYKKDTVTPTPITVNPVEPVKPVNPVVNKPVTVKPANDNTNPSTSNSVEKTTYSSLPTTGDTDQSKSSTIFGALLLLISAPLLLFKKK |
| 4MT5 Chain:A ((1-184)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MQTAYVKYVDDTTGETLRQDDLHGYTDETIPYSTAEGIKKYEGDGYVLVSDGFKPGTKFGVGTPTYEVHFKHGMTHTDAT-DKNAEQKTVTETIHYVDENNQTVQPDSTTAVTFKRGYTTDNVTGKVVSYDPWTVDG-NQADSKTFAAVPSPAVEGYTPNHQQIN-EFTV-------TPDSKDIVKTVVYVGDP------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MT5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 12496 for 1093 contacts (11.4/contact) +
2D Compatibility (PS) -18753 + (NN) -8329 + (LL) 12980
1D Compatibility (HY) -400 + (ID) 1800
Total energy: -3806.0 ( -3.48 by residue)
QMean score : 0.121
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