Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEVKEYKQLNGLALAYMGDAVYEKFIREYLLA-AGKTKPNQLHKTATKFVSAKGQAVALKAMIAEGFLTEEEDRIAKRGRNAKSYTVPKNTDPGTYSMSTSFEAVLGYLYLA-GEMERLQEWMEKALEIVEKGVETN
2QVW Chain:A ((331-447))
--------TDVFQRLELLGDAVLGFIVTARLLCLFPDASVGTLVELKMELVRNEALNYLVQTLGLPQ--------LAEFSNNL-----------KSKTWADMYEEIVGSIFTGPNGIYGCEEFLAKT-----------
General information:
TITO was launched using:
RESULT:
Template:
2QVW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45975 for 641 contacts (-71.7/contact) +
2D Compatibility (PS) -10715 + (NN) -6207 + (LL) 2660
1D Compatibility (HY) -7600 + (ID) 750
Total energy: -68587.0 ( -107.00 by residue)
QMean score : 0.477
(partial model without unconserved sides chains):
PDB file :
Tito_2QVW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QVW-query.scw
PDB file :
Tito_Scwrl_2QVW.pdb
: