Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTFPQVLTIAGSDSGGGAGIQADIKTFQERRTFGMSVITAI-TAQNTLGVKAVHKIPVEMIREQCDAIAEDFQVSAVKTGMLADAEIIREVVRNIRLHNFPNLVIDPVMIAKGGTALLENEATQVLKDELLPLGTIITPNIPEAEEILG-EKITTKAEIERAAKKIYDMGVKAVVIKGGHS-EMTEAADFYFDGVTAKWLTSERFDTPHTHGTGCTFSACIAAELAKGNSLLDSVMVAKEFISSAIKYPLGIGHGHGPTNHFAY-RMEDGK
4C5L Chain:D ((5-267))----KVLTIAGSDTSAGAGMQADLKTFQELDTYGMVALTAIVTMDKDTWSHDVTPLPMDVFEKQLET-ALSIGPDAIKTGMLGTEEIIKRAGEVYEASNAQYFVVDPVMVCKG-----NPGNTEAMIKYLLPKATVVTPNLFEAGQLSGLGKLNSIEDMKKAATIIFDKGAQHVIIKGGKALDQDKSYDLYYDGQTFYQLTTDMFQ--YNHGAGCTFAAATTAYLANGKSPKEAVISAKAFVASAIKNGWKMNDFVGPVDHGAYNRIE---


General information:
TITO was launched using:
RESULT:

Template: 4C5L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109904 for 2315 contacts (-47.5/contact) +
2D Compatibility (PS) -28112 + (NN) -8477 + (LL) 560
1D Compatibility (HY) -14800 + (ID) 5200
Total energy: -165933.0 ( -71.68 by residue)
QMean score : 0.490

(partial model without unconserved sides chains):
PDB file : Tito_4C5L.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4C5L-query.scw
PDB file : Tito_Scwrl_4C5L.pdb: