Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFTSYFLTF-EDGARLEIMSRTDVTGKTTGENL-GWAHIAISTGTKEAVDELTEKLRQDGFAIAGEPRMT----GDGYYESVVLDPEGNRIEITW
3RRI Chain:A ((9-126))
-DVFHLAIPARDLDEAYDFYVTKLGCKLARRY---P-D-R-ITLDFFGDQLVCHLSDRWD-R-----EVSMYPRHFGITFRDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLLEFK-
General information:
TITO was launched using:
RESULT:
Template:
3RRI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38868 for 754 contacts (-51.5/contact) +
2D Compatibility (PS) -12228 + (NN) -3487 + (LL) 636
1D Compatibility (HY) -5200 + (ID) 1300
Total energy: -60447.0 ( -80.17 by residue)
QMean score : 0.437
(partial model without unconserved sides chains):
PDB file :
Tito_3RRI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RRI-query.scw
PDB file :
Tito_Scwrl_3RRI.pdb
: