Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTYLVTGATGGLGGYALNYLKELVPMSDIYALVRSKEKGA---------DLKAAGFNIRVGDYSDAESMKQAFAGIDRVLFVSGAPGNRQVEHENVINAAKKAG-VSYIAYTSFAGAD-K------STSALAEDHFFTEKVIEKSGIAHTFLRNNWYFENEM-PMIG---GALSAGKFVYAA-ENGKVGWALKREYAEVAAKAVAG-AGFPEILELS-GPL-MTYEELTKALKEATGKDFDVISSDDKGFVENLVSVGLPQPVAEMFLSFQHDIKNDQ-LDVT----SDDFE-KALGKPLTNRVDALRELLK |
| 3C1O Chain:A ((5-308)) | EKIIIYGGTGYIGKFMVRASLSFS--HPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVISALPFP--MISSQIHIINAIKAAGNIKRFLP-SDFGCEEDRIKPLPPFESVLEKKRIIRRAIEAAALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKSGLSFKKVHMPDEQLVRLSQELPQPQN--IPVSILHSIFVKGDLMSYEMRKDDIEASNLYPELEFTSIDGLLDLFI- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C1O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -114678 for 2208 contacts (-51.9/contact) +
2D Compatibility (PS) -30068 + (NN) -16556 + (LL) 268
1D Compatibility (HY) -13200 + (ID) 2050
Total energy: -176284.0 ( -79.84 by residue)
QMean score : 0.564
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