Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------------------MLKKRLLLASRWIIMLIIYAGLWTYTLFQGDTASWFLTYFFSF---------------------------------------ILLLLFLSSIYPL---KAWKVNRSFVKNTYHD----------------------GDLIDMQVSFTRK-SRYPVGYLLFQQKIPATFGKVRARQQVVYPLFKKQFTVTLAGFVGVRGIHSFPPVDVETSDAFGLLERSRQLSSEKSLTIYPT-------------YFPN----VLEKISEASPENERNAAYWTLKKNSNLH---SLREFSSGDRISLIDWKSSAKSDQLMTREFENSATSRLSVIFY------GASHPNFEL-----SLRAAYSFIRKISEENGEIRVTLLGDQTSKFAPAKGTSRLQDISTAFAEIAPVDSLTLQESLDSN----------LHSGEKILLFTPCM------------DTMLMQKVTRLTDNKQLQIITFQSEHSKAMDAPAIFLEQASLLSRWERETK------- |
| 1D2M Chain:A ((2-583)) | TFRYRGPSPKGDQPKAIAGLVEALRDGERFVTLLGATGTGKTVTMAKVIEALGRPALVLAPNKILAAQLAAEFREL--FPENAVEYFISYYDYYQPEAYVPGKDLYIEKDASINPEIERLRHSTTRSLLTRRDVIVVASVSAIYGLGDPREYRARNLVVREVLLERLLELGYQRNDIDLSPGRFRAKGEVLEIFPAYETEPIRVELGFVLF----PATHYLSPEGLEEILKEIEKELWERVRYFEERGEVLYAQRLKERTLYDLEMLRVMGTCPGVENYARYFTGKAPGEPPYTLLDYFPEDFLVFLDESHVTVPQLQGMYRGDYARKKTLVDYGFRLPSALDNRPLRFEEFLERVSQVVFVSATPGPFELAHSGRVVEQIIRPTGLLDPLVRVKPTENQILDLMEGIRERAARGERTLVTVLTVRMAEELTSFLVEHGIRARYLHHELDAFKRQALIRDLRLGHYDCLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNARGEVWLYADRVSEAMQRAIEETNRRRALQEAYNLEHGITPETV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1D2M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92133 for 2558 contacts (-36.0/contact) +
2D Compatibility (PS) -38824 + (NN) 2115 + (LL) 736
1D Compatibility (HY) -15200 + (ID) 2750
Total energy: -146056.0 ( -57.10 by residue)
QMean score : 0.249
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