Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LIIDVLQHVPHEGPGLIANWARENQHQLKIHSLFEENAHVP-NDSDFLIVLGGPMGINDTAEFPWLKDERKLIKRLSEQHKPVFGVCLGAQQIAATFGSEITVNKEKEVGWFPVKRTS---------------------------DKLLF--FPK-SLNVFHWHQDTF-ALPTGSTRLFASEGCLNQAFLYG-ENIIGLQFHFEMEK-----AGIETILRIDEAFITPGKYVQSVEVMREKDVPEDNKQMLEAILDYLINPKTI
3UOW Chain:A ((8-255))
DKILVLN-FGSQYFHLIVKRLNNIKIFSETKDYGVELKDIKDMNIKGVILSGGPYSVTEA-GSPHLK--KEVFEYFLEKKIPIFGICYGMQEIAVQMNGEVKKSKTSEYGCTDVNILRNDNINNITYCRNFSSAMDLYSNYKLMN-CCLFENIKSDITTVWMNHNDEVTKIPENFYLVSSSENCLICSIYNKEYNIYGVQYHPEVYESLDGELMFYNFAY--------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3UOW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121876 for 1482 contacts (-82.2/contact) +
2D Compatibility (PS) -19233 + (NN) -5643 + (LL) 3612
1D Compatibility (HY) -12000 + (ID) 2150
Total energy: -157290.0 ( -106.13 by residue)
QMean score : 0.482
(partial model without unconserved sides chains):
PDB file :
Tito_3UOW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UOW-query.scw
PDB file :
Tito_Scwrl_3UOW.pdb
: