Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKWEEKRDMVKIATWYYHYGWTQAQIAKKIGISRSIISKTLQRAKDLGIVEIFIKDETYYTVDLEQKLEEKFGLEEAIVVATHDMSEEEALNFLAKEAAYTLSKRIAKVKTLGISWGK-TIRKFANEFPFIPHKDLTIIPLIGGMGSSDIDLHSNQICYDLKKKMKCHSKYLYAPALVEDTEMKTDLSKNKYISEVLEEGKTVDMAIVGVS--SPYNHSTMEEIGYINSEDIEELRYKDVVGDINSRFFTADGKEAKTEINTH--VIGLSLEELKNIPTVVALANGLQKKEALVAALNAGLIDVIVITDRMAEYILQKND |
| 4L50 Chain:A ((17-266)) | ---------------------------------------------------------FEGCLEYETQLRRQFSLQHVRVIP--GLAD--VGGRLGIGAAHMLMSLLQPQQMLAIGFGEATMNTLQRLSGFISSQQIRLVTLSGGVGSYMTGIG--------QLNAACSVNIIPAPLRASSADIARTLKNENCVKDVLLAAQAADVAIVGIGAVSQQDDATIIRSGYISQGEQLMIGRKGAVGDILGYFFDAKG-DVVTNIKIHNELIGLPLSALKTIPVRVGVAGGENKAEAIAAAMKGGYINALVTDQDTAAAILRS-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L50.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132256 for 2090 contacts (-63.3/contact) +
2D Compatibility (PS) -26471 + (NN) -9161 + (LL) 6076
1D Compatibility (HY) -14000 + (ID) 3500
Total energy: -179312.0 ( -85.80 by residue)
QMean score : 0.507
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