Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDFHIRKATNSDAEAIQHVAITSWHHTYQDLIPGDVQDDFLERFYNVETLHNRISATPFAVVEQADKVIGFANFIELEKGKSELAAFYLLPEVTQRGLGTELLEVGMTLFHVPLPMFVNVEKGNETAIHFYKAKGFVQVEEFTEDFYGYPLETIRFNLNHHAFEEE
2FIW Chain:A ((7-160))
-TPALRPYLPEDAAVTAAIFVASIEQLTADDYSEEQQEAWASAADDEAKFAARLSGQLTLIATLQGVPVGFASLKG----PDHIDMLYVHPDYVGRDVGTTLIDALEKLAGARGALILTVDA-SDNAAEFFAKRGYVAKQRNTVSINGEWLANTTMTKSL------
General information:
TITO was launched using:
RESULT:
Template:
2FIW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81232 for 1193 contacts (-68.1/contact) +
2D Compatibility (PS) -16174 + (NN) -3805 + (LL) 840
1D Compatibility (HY) -2400 + (ID) 1300
Total energy: -104071.0 ( -87.23 by residue)
QMean score : 0.363
(partial model without unconserved sides chains):
PDB file :
Tito_2FIW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FIW-query.scw
PDB file :
Tito_Scwrl_2FIW.pdb
: