Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLIPDNLLQPVVGKKQVEPKESLAEELVE--LPFISLLMENSPAPLIKGEADNEEQATIPLKEIAPS----LVSAKLLDSEPETKLPSAPLELKEVKETLAAIAKQAIDQPKIDSAPQVAQPPEMNTPKEPTKNTTREQQPPPELIMP----TKDSPKLAENVAKNQPALAKLPQEKEAVQLFKASIKEPVTAKEEVAVKKPA--ESSNIWHDTTKQLTPAAKVEVPVTLKQLDKTITDQIEQLQKFQVKQNKA----FFAI--QPESLGKVEVLLKKMPDK----IFVHIEYQEQTAKQKLEQM---AQDLHNRFRDRGVEVAVTMTEKQAPKENGQGSEGRHHGESKKEKERENPHQEKAKQQVFDLEEET |
| 1Y10 Chain:A ((14-376)) | ----DDLLGDL-GGTARAERAKLVEWLLEQGITPDEIRATNPPLLLATRHLVGDDGTYVSAREISENYGVDLELLQRVQRAVGLARVDDPDAVVHMRADGEAAARAQRFVELGLNPDQVVLVVRVLAEGLSHAAEAMRYTALEAIMRPGATELDIAKGSQALVSQIVPLLGPMIQDMLFMQLRHMMETEAVNAGERAAGKPLPGARQVTVAFADLVGFTQLGEVVSAEELGHLAGRLAGLARDLTAPPVWFIKTIGDAVMLVCPDPAPLLDTVLKLVEVVDTDNNFPRLRAGVASGMAVSRAGDWFGSPVNVASRVTGVARPGAVLVADSVREALGDAD------GFQWSFAGPRRLRGIRGDVRLFRVRR-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Y10.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 117280 for 2355 contacts (49.8/contact) +
2D Compatibility (PS) -35212 + (NN) -1157 + (LL) 888
1D Compatibility (HY) -6400 + (ID) 2400
Total energy: 72999.0 ( 31.00 by residue)
QMean score : 0.238
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