Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VRKLGLMTILFWM-FLSVQAFAADLEPPMISLEKEQRVFTSGEVISFHVKNPEELKIVLVNEHGQRKLLDGETYTVTDWDLDGNYQAEFYQADISKPVVTVEDLFEVKQLEEVAKDETA--PSLKMIEITHDEDV-LPTSVLYASAELDDAESGV---KQAILLVHSKSNE---SEMELIRNNYTGEFDAEIPLE-KFQLGEELTFQLQLVDFAENEIT----LDLENTIQLYEPKAPVLSYDGSDITNVQKKIGQVGNRIELTLDKY----TTEFPELETENGKTIPLLWQKTATEWKGSLALTTE-LSGEIIHIQEMNQYMLVRATSEPFGDIQLINNSILTGTIHPDFTFISNLYVEVNGQNFPIKRTDNSFTSAEITTTGKITLHWTDWDGQVFSKQMNQEIKPVIEMPDKETIAPPSVI----PKEKESLLTSPDPKPSVESHENTPKKQEKKETSTKNKSSSIPFWIPALMIIGVIIFSGNRAMK |
| 4O7O Chain:A ((6-454)) | ----TLATKLPWSDWLSRQRWYA-------GRNRELATVKPGVVVALR----HNLDLVLVDVTYT----DGA--TERYQVLVGWDKAAIGVADDRTGFDALYDVAGPQFLLSLIVSSAVCGTSTGEVTFTREPDVELPFAAQPRVCDAEQSNTSVIFDRRAILKVFRRVSSGINPDIELNRVLTRAGNPHVARLLGAYQFGDALAYALGMVTEYEANAAEGWAMATASVRDLFAEGDLYAHEVGGDFAGESYRLGEAVASVHATLADSLGTAQATFPVDRMLARLSSTVAVVPELREYAPTIEQQFQKLAAEAITVQRVHGDLHLGQVLRTPESWLLID---FEG--EPGQP-----LDERRAPDSPLRDVAGVLRSFEYAAYGPLVDQATD-------KQLAARAREWVERNRAAFCDGYAVASGIDPRDSALLLGAYELDKAVYETGYETRHR--------------PGWL------PIPLRSIARLTA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4O7O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 33519 for 3150 contacts (10.6/contact) +
2D Compatibility (PS) -41335 + (NN) 10278 + (LL) 4020
1D Compatibility (HY) -9200 + (ID) 4100
Total energy: -6818.0 ( -2.16 by residue)
QMean score : 0.055
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