Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLNENIKAIRKSKGLSQEEIAIKLNVVRQTIS----KWEQGLSVPDSDMLISISEVLETPVSTLLGETVMVSKVDDVKAISEKLEIINLQFAQRKTARRKMLYWLFVSLCAVIAIISAVFIILNSPYLGWDYSDPETSVIGVAFHTFEWLFVRLAPIILIGGVVGIFLTRKNV
4JCX Chain:B ((1-64))
MLIRRLKDARLRAGISQEKLGVLAGIDEASASARMNQYEKGKHAPDFEMANRLAKVLKIPVSYL-------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4JCX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30509 for 385 contacts (-79.2/contact) +
2D Compatibility (PS) -6220 + (NN) -982 + (LL) 10308
1D Compatibility (HY) -2400 + (ID) 1000
Total energy: -30803.0 ( -80.01 by residue)
QMean score : 0.654
(partial model without unconserved sides chains):
PDB file :
Tito_4JCX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4JCX-query.scw
PDB file :
Tito_Scwrl_4JCX.pdb
: