Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTERALQVTNLHKKIRKRE---IIKGISFEVMPGEVFGFLGPNGAGKTTTIRMIVGLIKPTSGTILIGGKDIRKNFTEAMRG-LGSIVENPEFYTFLTGQENLAYFARMDSSIKKERIQEVTELV-----------GLEKRINDRVSTYSLGMRQRLGIAQALLSNPKLLILDEPTNGLDPSGIHEMRDFIRALARNEGISVLVSSHLLSEIELLCDRVAIMTDGTIIKTDQVAHLLSSRAQLRWRVTPIEQAKAFLESVTEVEVDGEYLVTAMNEESAEWNEQLVAKGIKVHEIDKRKPSLEDLFLELTGGQSID |
4AYX Chain:A ((341-570)) | ----ALEFKNVHFAYPARPEVPIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPASGTISLDGHDIRQLNPVWLRSKIGTVSQEPILFS-CSIAENIAYGADDPSSVTAEEIQRVAEVANAVAFIRNFPQGFNTVVGEKGVLLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLVQEALDRLM--DGRTVLVIAHRLSTIK-NANMVAVLDQGKITEYGKHEELLS------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AYX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133889 for 1635 contacts (-81.9/contact) +
2D Compatibility (PS) -23058 + (NN) 1323 + (LL) 7228
1D Compatibility (HY) -16000 + (ID) 3800
Total energy: -168196.0 ( -102.87 by residue)
QMean score : 0.573
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