Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNQVAPFYADHVGSILRTKGIKDAREKFQSGEITALELRKIENTEIKYIVEKQKEVGLKSITDGEFRRAWWHFDFLENLDGVEGYDAAGGIQFSKVQTKSHSVKITGPIDFTTHPFIEDFIFLKEAVGDNHVAKQTIPSPAM-LHYRGDIEYQPYLDDAEKFANDLATAYQKAIQAFYDAGCRYLQLDDTSWSYLCSDEQREVVRQRGFDPETLQETYKNLINEAIKHKPADMV-ITM-HICRGNFRSTWIAEGGYGPVAETLFGKLNIDGFFLEYDNERSGDFAPLKYVTRPDLKIVLGLITSKTGELEDEAAIKARIEEASEIVPLSQLRLSPQCGFASTEEGNILTEEEQWDKLRYVVRLANDIWGE |
| 1YPX Chain:A ((2-367)) | -NQVAPFYADHVGSILRTKGIKDAREKFQSGEITALELRKIENTEIKYIVEKQKEVGLKSITDGEFR--RWHFDFLENLDGVEG----------------YSVKITGPIDFTTHPFIEDFIFLKEAVGDNHVAKQTIPSP-AMLHYRGDIEYQPYLDDAEKFANDLATAYQKAIQAFYDAGCRYLQLDDTSWSYLCSDEGF--------DPETLQETYKNLINEAIKHKPAD--MVITMHICRGG----------YGPVAETLFGKLNIDGFFLEYDNERFA---PLKYVTRPDLKIVLGLITSKTGE-EDEAAIKARIEEASEIVPLSQLRLSPQCGFA--------TEEEQWDKLRYVVRLANDIWGE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YPX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -138283 for 2575 contacts (-53.7/contact) +
2D Compatibility (PS) -34229 + (NN) -17751 + (LL) 3872
1D Compatibility (HY) -40000 + (ID) 15200
Total energy: -241591.0 ( -93.82 by residue)
QMean score : 0.489
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