Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEYSYPLNPDWTTEEMTIVVQFLEAIERAYEKGIDTLELKEKYRAFKQVVPAKGEEKRIGIDFEKASGYSAYKVMQLVKNATTSKIKMQP
1JJ2 Chain:G ((12-73))
-------IPEWKQEEVDAIVEMIESRNTLLERALDD------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1JJ2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2302 for 141 contacts (16.3/contact) +
2D Compatibility (PS) -3100 + (NN) -1482 + (LL) 4876
1D Compatibility (HY) -2400 + (ID) 400
Total energy: -204.0 ( -1.45 by residue)
QMean score : 0.324
(partial model without unconserved sides chains):
PDB file :
Tito_1JJ2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JJ2-query.scw
PDB file :
Tito_Scwrl_1JJ2.pdb
: