Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MINQVYRLVSERQ-FEEANIEEA-LTEDVVVVRPTYLSICAADQRYYTGSRGKEMLSKKLPMALIHEGVGQVTYDATG--EFEIGTKVVMIPNTPTEDD---PVIAENYRRSSLFR----------------------SSGYDGLMQENVFMRRDRVVRLPENMDMEVAA-YSELISVAFHAITRFKQKANANQSVFGVWGDGNLGFITCLLLKTIYPESKVIIFGKTQYKLDFF-S-FVDEAHLVDEI----------PEGLVIDNAFECAGGKGSQYAVEQIIDLIKPE-GTISLLGVSENPIE--FNSRMVLEKGLTVFGSSRS---GKEDFQNTVNFLSENERAVEYLSSLIGQRKVVRNLQDIIEAFETDLRNPFGKTVMEWKV |
3UKO Chain:A ((7-377)) | ITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDP----EGLFPCILGHEAAGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAK--VEPGSNVAIFGLGTVGLAVAEGAKT-AGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIGN---VSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWKGTAFGGFKSRTQVPWLVEKYM-NKEI--KVDEYITHNLT---LGEINKAFDLLHEGTCLRCVLDTS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UKO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -169155 for 2832 contacts (-59.7/contact) +
2D Compatibility (PS) -35280 + (NN) -12161 + (LL) 1824
1D Compatibility (HY) -2000 + (ID) 2550
Total energy: -219322.0 ( -77.44 by residue)
QMean score : 0.447
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