Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNNIQAMRKKVEVQIADLQNETDEIAEFNQAKVLDAFQENKVSDFHFHPSTGYGYDDEG---RDTLEHVYATVFKTEAALVRPQIISGTHAISTVLFGILRPDDELLYITGQPYDTLEEIVGMRNQGQGSLKDFHIGYSSVPLLENGDVDFPLIAEKMTRKTKMIGIQRSRGYADRPSFTIDKIKEMIIFVKN-INPEVIVFVDNCYGEFAEYLEPTEVGADIIAGSLIKNPGGGLAKTGGYIAGKEALIDLCGYRLTTPGIGREAGASLYSLLEMYQGFFLAPHVTAQAIKGARFTAAMLAEFG-VV-A-DPT------WDA-----PRTDLIQSISFHNK-EKMVAFAQAIQAASPVNAHVLPIGAYMPGYEDDVIMAAGTFIQGASLELTADGPIREPYQLYVQGGLTYEHVKIAVTRAIQKTL |
1E5E Chain:A ((52-332)) | --------------------------------------------------SGYIYTRLGNPTVSNLEGKIAFLEKTEACVA---TSSGMGAIAATVLTILKAGDHLIS-DECLYGCTHALF------EHALTKFGIQVDFINTA-----IPGEVKKHMKPNTKIVYFETP----ANPTLKIIDMERVCKDAHSQE--GVLVIADNTFCSPMI-TNPVDFGVDVVVHSATKYINGHTDVVAGLICGKADLLQQIRMVGIKDITGS--VISPHDAWLITRGLSTLNIRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILKSGFEGAKKLLDNLKL------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1E5E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144998 for 2182 contacts (-66.5/contact) +
2D Compatibility (PS) -28396 + (NN) -16657 + (LL) 9692
1D Compatibility (HY) -6000 + (ID) 2650
Total energy: -189009.0 ( -86.62 by residue)
QMean score : 0.368
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