Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LTIKKAKNIKIIPLGGVDESGKNLYVVEIDEDIFILDAGLMFPENE-----LLGIDIVIPDFKYLEENKDRVKAIFLTHGHEDAIGALPYLLQK--IKAPVYGTELTIALAKSALKEHRK-L----------------RFKNFHVVNEETTLSFS-KIDVSFFRTTHTIPDSVGIVLETS--EGSIVYTGDFKFDQSAKDGYASDLSHIAEFGEKGVLALLSDSSEAEHPGTTSSDSLIEEEIRHAFRMA---DGRIIVACVASNLIRLQQVLDASVATKR------KVAIVGKELERVFEIAGSL-GKIVI--------------EEDLIVP---LKELKKY-SD-DEITIIET-GN--LGEPIQSLQLMTKGNHPQLNIKPGDTVYITTTPSPSLETM-MAKTMDMLYKA-----------GAKVLTMSNNLFISGHASQEDLKLMINLLK--PRYFVPVHGEYRMLISHAKLAH-EVGMAKSEVFIVGKGEILEYKNDKMTAGNRVYSGNTLIDGLGVGDVGNIVLRDRKLLSEDGIFIVVVTLNRKSKTITSGPEIISRGFIYVRESEHLIEESSKVVTKIVEKNLQETGFEWAKLKQDIRDQLNRYLFEQTKRRPMILPIIMEV |
| 3AF5 Chain:A ((187-650)) | ------RWIRITGLGGFREVGRSALLVQTDESFVLVDFGVNVAMLNDPYKAFPHF--DAPEFQYV-LREGLLDAIIITHAHLDHCGMLPYLFRYNLFDGPIYTTPPTRDLMVLLQKDFIEIQQSNGQDPLYRPRDIKEVIKHTITLDYGEVRDISPDIRLTLHNAGH-ILGSAIVHLHIGNGLHNIAITGDFKFIPTRLLEP----AN-AKF--PRLETLVMESTYGGANDIQMPREEAEKRLIEVIHNTIKRGGKVLIPAMA--VGRAQEVMMVLEEYARIGGIEVPIYLDGMIWE-ATAIHTAYPEYLSRRLREQIFKEGYNPFLSEIFHPVANSRERQDIIDSNEPAIIIASSGMLVGGPSVEYFKQL--------APDPKNSIIFVSYQAEGTLGRQVQSGIREIPMVGEEGRTEVIKVNMEVHTI---DGFSGHADRRELMNYVAKVRPRPERIITVHGEPQKCLDLATSIHRKFGI---STRAPNNLDTIRL----------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AF5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -224404 for 3494 contacts (-64.2/contact) +
2D Compatibility (PS) -43291 + (NN) -25127 + (LL) 10864
1D Compatibility (HY) -14400 + (ID) 4100
Total energy: -300458.0 ( -85.99 by residue)
QMean score : 0.521
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