Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKNNVLVTGGTGFLGMHIIFQLLQQGYQVKTTVRSLKSKEKVIEILQNNGITDFTHLSFVELDLSKDEGWKEAMLDCEYVLSVASPVFFGKFKNEEELISPAIEGITRILQAAKEAK-VKRVVMTSNFGAIGFSNADKNSITTEAYWTD---ELAKGLSA--YEKSKLIAEKEAWKFMENETELEFATINPVAIFGPSQSNHVSGSFDLLKNLLNGSMKRVINIPL-NVVDARDVADLHIRAMITPEANGERFIASADGEISMADIAHLLQRERPELVDKMPKKTLPNAAIRAAALFSKHAKEGELMINMNRQISNSKARDVLGWKPISTKEEAVLAAVDSLAKYGLLD
2IOD Chain:C ((7-273))---TVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAE--THLTLWKADLADEGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQE-HQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAK-ENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHIYLFENPKAEG-RYICSSHDCI-ILDLAKMLREKYPE-------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2IOD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126056 for 2112 contacts (-59.7/contact) +
2D Compatibility (PS) -28375 + (NN) -10801 + (LL) 6004
1D Compatibility (HY) -19200 + (ID) 4350
Total energy: -182778.0 ( -86.54 by residue)
QMean score : 0.486

(partial model without unconserved sides chains):
PDB file : Tito_2IOD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2IOD-query.scw
PDB file : Tito_Scwrl_2IOD.pdb: