Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LEKYVVIGNPIRHSLSPAMQNRIFQELGMNAEYNSVLIEEDAFETEIKKLMDSGVRGFNITTPFKERILPFLDELDNLAAASGAVNTVLKKED-KWYGFNTDGKGYLEGLEEIRSITEDDSILITGAGGASKAIYLALSTHTDAKITVANRTTEKAIEMTKDNNNHHAITLEEAEKQLADFTIIIQTTSIGLEASKNK-SPISLANVKQGTICSDIIYNPAETAFLKEAKKNGAITQNGLPMFVNQGALAFEIWTGIKP-ERSLMKEAVLEQLGGN |
| 3SEF Chain:C ((29-293)) | IDQYAVFGNPINHSKSPFIHTLFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGGRGCNVTVPFKEEAYRFADRLTERARLAGAVNTLKK-DDGEILGDNTDGEGLVQDLLAQQVLLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQLKQSYDVIINSTSA--------IDPVIFSSR---SVCYDMMYG-----------------IDGLGMLVGQAAESFMLWRGLRPGTKQILRE--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SEF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95276 for 1990 contacts (-47.9/contact) +
2D Compatibility (PS) -25315 + (NN) -8522 + (LL) 2036
1D Compatibility (HY) -14800 + (ID) 3900
Total energy: -145777.0 ( -73.25 by residue)
QMean score : 0.533
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