Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKENKVQWQVIAGIILALIIAIFAVINVDPVEVNFLFAQAEWPLILIILGSVLCGCLIIFFLNIAKSRGMKKKVKQLTTEKAELERQLAAAKAMKTHSSKVEKRDTENAVDTTK
4X01 Chain:A ((6-54))
--------------------------------------------------------------SVHWSIVYRQLGNLLEQYEVEIARLKSQLVLEKKLRIQVEKEMESVKTK---
General information:
TITO was launched using:
RESULT:
Template:
4X01.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 15361 for 191 contacts (80.4/contact) +
2D Compatibility (PS) -5456 + (NN) -3927 + (LL) 7360
1D Compatibility (HY) -400 + (ID) 400
Total energy: 12538.0 ( 65.64 by residue)
QMean score : 0.688
(partial model without unconserved sides chains):
PDB file :
Tito_4X01.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4X01-query.scw
PDB file :
Tito_Scwrl_4X01.pdb
: