Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFGFGNKDIGIDLGTANTLVYMKGKG-I--------VLREPSVVAMKKDTQEIVAVGSDAKNMIGRTPGNIVAI--------------------RPM-----------------KDGVIADYDTTAAMMKYYIQKAGKSVNASKPRVMICVPSGITGVEKRAVIDATRQAGAKDAFTIEEPFAAAIGAGLPV-GEPTGSMVVDIGGGTTEVAVISLGGIVT-----SRSVRTAGDDLDEVIINYIRKKYNLLI-------------GDRTAEAIKMEIGSASPKGLDLSPFSIRGRDLVTGLPKTIEITPEEISEALADTVAAIIDAVKGTLENTPPELSADIMDKGIVLTGGGALLRNLDTVISEETK-MPVIIADEPLDCVAIGTGKALENMDMYKRKKMN |
| 3QFU Chain:A ((16-393)) | ---NYGTVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTD---DERLIGDAAKNQVAANPQNTIFDIKRLIGLKYNDRSVQKDIKHLPFNVVNKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKIVRQLIKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMS-----TRIEIDS--FVDGIDLSETLTRAKFEELNLDLFKKTLKPVEKVLQDSGLEK---KDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQAGVL--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QFU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -138634 for 2606 contacts (-53.2/contact) +
2D Compatibility (PS) -33262 + (NN) -7570 + (LL) 1140
1D Compatibility (HY) -7200 + (ID) 3800
Total energy: -189326.0 ( -72.65 by residue)
QMean score : 0.417
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