Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVSIIGATGYGGLELIRLLHQHSSVDIATLHS---FSAQAETLATFYPHLKDLAVSPLEKIN-PTEIIEKSDTVFIATPSGIAKDIALPYVDAGLNVIDLSGDFRLKDRQLYEKWYGKSAAPTEYIGKAEYGLAEFRE--KKETTFIANPGCYATATLLGLAPLATNKLIDPTS-IIVDAKSGISGAGKVPSASTHFTETNENMTLYKMNSHQHIPEIMQQLTKWDESIPAIQFSTSLIPITRGIFTTIYVKPKNPITQKELHKLYESTYDNAPFVRIQPENVYPTVKQVTASNYCDIGL-AYNEKTNVITIVSVIDNLVKGAAGQAIQNLNIMANFAESDGLRFIPVYP |
| 3DR3 Chain:A ((5-337)) | LNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDISEFSPGVDVVFLATAHEVSHDLAPQFLEAGCVVFDLSGAFRVNDATFYEKYYGFTHQYPELLEQAAYGLAEWCGNKLKEANLIAVPGCYPTAAQLALKPLIDADLLDLNQWPVINATSGVSGAGRKAAISNSFCE--VSLQPYGVFTHRHQPEIATHLGA------DVIFTPHLGNFPRGILETITCRLKSGVTQAQVAQALQQAYAHKPLVRLYDK-GVPALKNVVGLPFCDIGFAVQ---GEHLIIVATEDNLLKGAAAQAVQCANIRFGYAETQSLI------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DR3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -205087 for 2896 contacts (-70.8/contact) +
2D Compatibility (PS) -34742 + (NN) -11548 + (LL) 540
1D Compatibility (HY) -26400 + (ID) 5850
Total energy: -283087.0 ( -97.75 by residue)
QMean score : 0.455
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