Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEGVENKVIVLAGMIGAGKSSYTELIANELG-TKAFYESIKD------NRILEMFYDDPKRWAFALQIYFLNTRFRSIKAAL------TD-QNNVLDRSIYEDA-LFTQINFEEGNISEPEMDTYLDLLDNMMEELAYMPKKAPDLLIYLRGSLDTVLSRIALRGRPYEQIDDNPGLLEYYKHLHSRYDSWFAS---------YDKSETLVINIDEIDINK-PNDADYVMQLIHEKLKR |
2OCP Chain:A ((1-239)) | ----GPRRLSIEGNIAVGKSTFVKLLTKTYPEWHVATEPVATWQNIQLGNLLDMMYREPARWSYTFQTFSFLSRLKVQLEPFPEKLLQARKPVQIFERSVYSDRYIFAKNLFENGSLSDIEWHIYQDWHSFLLWEFA--SRITLHGFIYLQASPQVCLKRLYQRAREEEK---GI-ELAYLEQLHGQHEAWLIHKTTKLHFEALMNIPVLVLDVND-DFSEEVTKQEDLMREVNTFVK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OCP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94400 for 1521 contacts (-62.1/contact) +
2D Compatibility (PS) -21518 + (NN) -7191 + (LL) 816
1D Compatibility (HY) -15200 + (ID) 2400
Total energy: -139893.0 ( -91.97 by residue)
QMean score : 0.466
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