Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQWTVKEMAAYVGISADTLRYYEKNKIIVPN-RLENGYRVYNTEHLLELKFILVMKYARFSLSEIKLMMEWLRSEPSVACNTASKELLALKAAEIKQTIAHYTKIAALLEELPQIDEVQDYSTVQKDVNTFVEHIFTDIRKDGF
2VZ4 Chain:A ((1-105))
--SYSVGQVAGFAGVTVRTLHHYDDIGLLVPSERSHAGHRRYSDADLDRLQQILFYRELGFPLDEVAALLDD-------------RAHLRRQHELLSARIGKLQKMAAAVEQAME------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2VZ4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54283 for 595 contacts (-91.2/contact) +
2D Compatibility (PS) -11183 + (NN) -10581 + (LL) 3060
1D Compatibility (HY) -5600 + (ID) 1250
Total energy: -79837.0 ( -134.18 by residue)
QMean score : 0.614
(partial model without unconserved sides chains):
PDB file :
Tito_2VZ4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2VZ4-query.scw
PDB file :
Tito_Scwrl_2VZ4.pdb
: