Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKPVIGITGNRLVKGVDVFYGHRVTYTQQRYVDAIQKVGGFPIALPIDDPSVAVQA-ISLVDGLLLTGGQDITPQFYLEEPSQEIGAYFPPRDSYEIALVRAALDAGKPIFAICRGMQLVNVALGGSLYQDISQVETKALQHLQR-V---------DEQLGSHTIDI-------EPTSELAKHHP-NKKLVNSLHHQFIKKLAPSFKVTARTADGMIEAVEGDNLPSWYLGVQWHPELMFQTDPESEQLFQALVDESKKTMVK |
| 3UOW Chain:A ((20-256)) | ---------------------------FHLIVKRLNNIKIFSETKDYGVE--LKDIKDMNIKGVILSGGPYS-V--TE-AGSPH----------LKKEVFEYFLEKKIPIFGICYGMQEIAVQMNGEVKKSKTSEYGCTDVNILRNDNINNITYCRNF---SSAMDLYSNYKLMN--CCLFENIKSDITTVWMNHNDEVTKIPENFYLVSSSENCLICSIYNK--EYNIYGVQYHPEVYES--LDGELMFYNFAYN------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UOW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57004 for 1436 contacts (-39.7/contact) +
2D Compatibility (PS) -19210 + (NN) -4155 + (LL) 3024
1D Compatibility (HY) -9200 + (ID) 1800
Total energy: -88345.0 ( -61.52 by residue)
QMean score : 0.373
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