Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LFEKTNRMNLLFDFYQELLTTKQKAYVSFYYLDDYSLGEIAEEFEVSRQAIYDNIKRTEESLEKYEEKLGMLKKYQQREKLFTQLEAQLTKKNFLDEQVKDTLEQLKNID
1RP3 Chain:A ((174-233))
-------LTEKVKEAVSKLPEREKLVIQLIFYEELPAKEVAKILETSVSRVSQLKAKALERLREMLS-------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1RP3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21175 for 374 contacts (-56.6/contact) +
2D Compatibility (PS) -6368 + (NN) -264 + (LL) 4404
1D Compatibility (HY) -2400 + (ID) 400
Total energy: -26203.0 ( -70.06 by residue)
QMean score : 0.516
(partial model without unconserved sides chains):
PDB file :
Tito_1RP3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RP3-query.scw
PDB file :
Tito_Scwrl_1RP3.pdb
: