Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTERGLLIVLSGPSGVGKGTVREAVFKDPETSFDYSISMTTRLPREGEQDGVDYYFRSREVFEQAIKDGKMLEYAEYVGNYYGT-PLEYVEEKLAAGVDIFLEIEVQGAMQVRKA--MPEGIFIFLTPPDLSELKNRIIGRGTESMEVVEERMETAKKEIE--MMASYDYAVVNDVVANAVQKIKGIVETEHLKTERVIHRYKKMLEGLQ
1Z6G Chain:A ((26-203))
-------LVICGPSGVGKGTLIKKLLNEFPNYFYFSVSCTTRKKREKEKEGVDYYFIDKTIFEDKLKNEDFLEYDNYANNFYGTLKSEYDKAKEQNKICLF-EMNINGVKQLKKSTHIKNALYIFIKPPSTDVLLSRLLTRNTENQEQIQKRMEQLNIELHEANLLNFNLSIINDDLTLTYQQLKN------------------------
General information:
TITO was launched using:
RESULT:
Template:
1Z6G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37389 for 1213 contacts (-30.8/contact) +
2D Compatibility (PS) -19039 + (NN) -9925 + (LL) 3388
1D Compatibility (HY) -16000 + (ID) 3100
Total energy: -82065.0 ( -67.65 by residue)
QMean score : 0.452
(partial model without unconserved sides chains):
PDB file :
Tito_1Z6G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z6G-query.scw
PDB file :
Tito_Scwrl_1Z6G.pdb
: