Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPTPSMEDYIEKIYSLIETKGYARVSDIADELFVHPSSVTKMVQKLDKDEYLIYEKYRGLILTPKGTQMGKRLLERHALLESFLSIIGVDPSHIYHDVEGIEHHLSWNSIDRIGDVVQFFENHPDALKTLKAMETTKPETKE
4HV6 Chain:B ((3-133))
---PSMEDYIEQIYMLIEEKGYARVSDIAEALAVHPSSVTKMVQKLDKDEYLIYEKYRGLVLTSKGKKIGKRLVYRAELLEQFLRIIGVDEEKIYNDVEGIEHHLSWNSIDRIGDLVQYFEEDDARKKDLKSIQ--------
General information:
TITO was launched using:
RESULT:
Template:
4HV6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76947 for 860 contacts (-89.5/contact) +
2D Compatibility (PS) -13589 + (NN) 215 + (LL) 472
1D Compatibility (HY) -18400 + (ID) 4900
Total energy: -113149.0 ( -131.57 by residue)
QMean score : 0.535
(partial model without unconserved sides chains):
PDB file :
Tito_4HV6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HV6-query.scw
PDB file :
Tito_Scwrl_4HV6.pdb
: