Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKNNREKLLALFTESDGTYLSGQEIADSLGCSRTAVWKQMEALRKEGFEIEAVRNRGYRLSATAEQYTKDALLLGLETKFIGQHLEVHESVNSTQIIAHQQIETSPEGTVIVADEQTAGKGRLLRPWSSKKGEGIWMSVILKPQIPIQKVPQFTFIASLAITEAIENITKLEPKIKWPNDIYIGKRKICGVLTEMQAEAETIHAVIIGMGINVNQQEFPEEIKDKASSLKLELGESVSRKALLQEILTSLEKYYELFLDKGFAPIKLLWETKAIPFGEKLTASTTKGKIHGQVKGISDEGVLLLQDTLGEVHSIYSADILLDNEK |
2DVE Chain:B ((1-232)) | ------------------------------------------------------------------------MLGLKTSIIGRRVIYFQEITSTNEFA--KTSYLEEGTVIVADKQTMGHGRLNAKWESPEG-GLWLSIVLSPKVPQKDLPKIVFLGAVGVVETLKEFS-IDGRIKWPNDVLVNYKKIAGVLVEGKGD-----KIVLGIGLNVNNK-----VPNGATSMKLELGSEVPLLSVFRSLITNLDRLYLNFLKNPMDILNLVRDNMILGVRVKILGD---GSFEGIAEDIDDFGRLIIRLDSGEVKKVIYGDVSL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DVE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134330 for 1908 contacts (-70.4/contact) +
2D Compatibility (PS) -25035 + (NN) -6608 + (LL) 6788
1D Compatibility (HY) -25200 + (ID) 3900
Total energy: -188285.0 ( -98.68 by residue)
QMean score : 0.496
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