Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKGTIVIVGLGLIGGSIALAIKAKHPEAHIIGIDVSYHSLEVGKSLGVIDEIGESILIDGPKADLLIFCCPVKETEQLLMRLPGLR-LKENVIVTDTGSTKGTIMEASTALRE-SGITFIGGHPMAGSHKSGVRAAKELLFENAYYLLTPTKD-VTEDNVTDLKTWLSGTNAKFLVLSPNEHDEITGMLSHLPHIVAAALVNQTQSFTEEHPAAFRLAAGGFRDITRVASSDPRMWTDISISNKKTLTKQLTIWRDSMNQALEMLESEDATSIYAFFDGAKEFRDSLPVHQGGAIPSFYDLFVDVPDYPGVISEVTRYLGEEEISLTNIKILETREDIFGVLQITFQSDEDRDRAKRCIETRSNYTCHYE |
| 3B1F Chain:A ((6-289)) | -EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILAVPIKKTIDFIKILAD-LDLKEDVIITDAGSTKYEIVRAAEYYLKDKPVQFVGSHPMA----SGAVAANVNLFENAYYIFSPSCLTKP-NTIPALQDLLSGLHARYVEIDAAEHDCVTSQISHFPHIIASSLMKQAGDFSESHEMTKHFAAGGFRDMTRIAESEPGMWTSILLTNQEAVLDRIENFKQRLDEVSNLIKARDENAIWAFFNQSRQIRKNM----------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B1F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -129167 for 2145 contacts (-60.2/contact) +
2D Compatibility (PS) -29428 + (NN) -4615 + (LL) 5620
1D Compatibility (HY) -24400 + (ID) 5200
Total energy: -187190.0 ( -87.27 by residue)
QMean score : 0.385
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