Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTDELEQKAL-ITIFGGTGDLANRKLYPSLYHLYSKGSLGDNFAVIGTARREWSN--DFFRDKVKESIKDIDGSEKDADAFASHFYYQSHDVTNKESYLTLKDLSDELDAKY---ELDGNRLFYLAMAPNFFGTIASRIKSEGFVDTD--GFHRLIIEKPFGHDLASAEELNNSLRQAFKEDEIYRIDHYLGKEMIQNISVIRFANSIIESLWNNRYIDNIQVTLTEVLGVEDRGRYYDESGALRDMVQNHILQIVSLLAMEPPINLSTREIRHEKVRALRSLRVFEGKEVHQSFIRGQYGPGEVDGKELKGYRQEDNVDPHSNTETFVAAKLEIDNFRWAGVPFYIRTGKRLAKKTTQIAIQFKDVPLNLFGQQQSLGGNVLVIHIQPDEGITLHLNVKEPGQGMVTMPVNLNYIHSSPDGMNTPEAYEKLILDCLRGDATYFSHWDEVSLSWNFIDHIADVWTNTKDHFPNYKSGSMGPKEADDLIQRDGFQWFPID |
4E9I Chain:C ((46-529)) | VSPELRSRALTIVVLGASGDLAKKKTFPALFQLYCNGMLPRDVNILGYARSTMEDVEKWKKDTLAGFFTRLDERGCHVGNFLRRISYMTGSYDRDEDFARLNERILRMEEAFQGPEKGGNRLFYLALPPSVFVGVC-RGLSKGAMQKPELGWVRLIVEKPFGRDTETSEQLSNQLKPLFNERQVFRIDHYLGKEMVQNIIVTRFANRVFSALWNSNSIACVQITFKEKIGTAGRGGYFDSIGIIRDVIQNHLTQILSLLTMEKPRSLSAEDIRDEKVQVLRQVVPANPAEC----VLGQY-TASADGST-PGYLDDPSVPKGSHCPTFAVLRLHVNNDRWHGVPFIIRAGKALEERLLDIRIQFKD-EIRPFG--ESTQRNELVIRAQPSEAMYLKLTAKTPGLLNDTHQTELDLTYERRYDVTLPDAYESLIHEALLGNSTNFVRVDELDAAWRIYTPLLHAIDRGEVKVLPYAAGSCGPEEAQEFIRISGYK----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4E9I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -202993 for 3915 contacts (-51.9/contact) +
2D Compatibility (PS) -50858 + (NN) -15832 + (LL) 952
1D Compatibility (HY) -36800 + (ID) 8950
Total energy: -314481.0 ( -80.33 by residue)
QMean score : 0.452
|
|
|