Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVPFRRTSKAKKRKRRTHVKLQLPGMNECSNCGEYRLS---------HHVCPECGQYDGKDVANS
3QT1 Chain:I ((22-54))
------------------------TTFRFCRDCNNMLYPREDKENNRLLFECRTCSY---------
General information:
TITO was launched using:
RESULT:
Template:
3QT1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2843 for 109 contacts (-26.1/contact) +
2D Compatibility (PS) -2701 + (NN) -1578 + (LL) 2344
1D Compatibility (HY) -2400 + (ID) 200
Total energy: -7378.0 ( -67.69 by residue)
QMean score : 0.698
(partial model without unconserved sides chains):
PDB file :
Tito_3QT1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QT1-query.scw
PDB file :
Tito_Scwrl_3QT1.pdb
: