Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKVIVACGSGVATSQTVASKVERILKEKGVRATVEAVDI-KS---LEQHIKTSDVYVAITKANKEFDIPTLNGIAFLTGMGMDEETEKLLNALK
3FNI Chain:A ((4-67))
ETSIGVFYVSEYGYSDRLAQAIINGITKTGVGVDVVDLGAAVDLQELRELVGRCTGLVIGMSPA-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3FNI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23003 for 348 contacts (-66.1/contact) +
2D Compatibility (PS) -6656 + (NN) -4175 + (LL) 1908
1D Compatibility (HY) -3200 + (ID) 500
Total energy: -35626.0 ( -102.37 by residue)
QMean score : 0.537
(partial model without unconserved sides chains):
PDB file :
Tito_3FNI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FNI-query.scw
PDB file :
Tito_Scwrl_3FNI.pdb
: