Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLVNMKQLLEVAKENKFAVGAFNVADSNFLRVVVEEAEKNNAPAIIAVHPTELDFTKDDF-FQYVLARIKNSP-VPFVLHLDHGDNMGDVMRAVRCGFSSVMIDGSLLPFEENIRVTKEVVDVCHKLGVSVEGELGTIGKTGNSIEGGVSEIIYTKPEEAEEYISRTGVDTLAVAIGTAHGIYPKDKEPKLRLDILKEIKALVNIPLVLHGGSANPD---------------------AEIAAAVEIGIQKVNISSDYKYAFYKKCREILSTTE-LWDANAIYPDCIDAAKEVVKYKMGLFESIGQVEKYQQAKTTAWRSELI |
3N9R Chain:P ((1-307)) | MLVKGNEILLKAHKEGYGVGAFNFVNFEMLNAIFEAGNEENSPLFIQASEGAIKYMGIDMAVGMVKIMCERYPHIPVALHLDHGTTFESCEKAVKAGFTSVMIDASHHAFEENLELTSKVVKMAHNAGVSVEAELGRLMGI----------AVLVNPKEAEQFVKESQVDYLAPAIGTSHGAFKFKGEPKLDFERLQEVKRLTNIPLVLHGASAIPDNVRKSYLDAGGDLKGSKGVPFEFLQESVKGGINKVNTDTDLRIAFIAEVRKVANEDKSQFDLRKFFSPAQLALKNVVKERMKLLGSANKI---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3N9R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -155784 for 2405 contacts (-64.8/contact) +
2D Compatibility (PS) -30046 + (NN) -16256 + (LL) 1620
1D Compatibility (HY) -21600 + (ID) 5200
Total energy: -227266.0 ( -94.50 by residue)
QMean score : 0.604
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