Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceLVEQLVSNAAILLAGFYIISLVYKEPITKELSTNKKIVIGIWAGLLGFALMVFGIPISNNVIVDLRHIPIIMVGFYGGPIPAIVSAIIISASRFLLSVNSAAIMAAVVMMLIGIITAIFGKRIEKFKIWGVFILNIIACSFVVINLHLILARESHFWINMTVFVLIALVIGAVSAGLMSNMIKSKQLFQKYEQDSTLDYLTKLSNVRQFDEKINHVMDA-GSRQVTLMLIDIDYFKNINDTYGHDAGDAILKQLAIILKRNTSDGSEAFRNGGEEFSIVLLDCPIEKGNFFAEQVRRETEEYDFMIPSGQVVKITISVGVSSSKDGANTSEGLFKSADEALYKAKLTGRNQVCIADGN
3TVK Chain:A ((4-164))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH-SEGHINITVTAGVSRAFP-EEPLDVVIGRADRAMYEGKQTGRNRCMFIDE-


General information:
TITO was launched using:
RESULT:

Template: 3TVK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74409 for 1238 contacts (-60.1/contact) +
2D Compatibility (PS) -18128 + (NN) -12175 + (LL) 18904
1D Compatibility (HY) -9600 + (ID) 2750
Total energy: -98158.0 ( -79.29 by residue)
QMean score : 0.534

(partial model without unconserved sides chains):
PDB file : Tito_3TVK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TVK-query.scw
PDB file : Tito_Scwrl_3TVK.pdb: