Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKMAVISLVLLLFLVGCGKEEAAQKPEQKTDKEPKIVATTVAITEIMDKLDLPLVGIPSSSK------KLPKRYADVKETGSPMGPDLEIIRMLKPDMVLSTKTLEADLKSGFEGADLEADFLDFTSIASMQTEIKNLGAKFDRIEEATKLNKDLTSDIDQVKSNVAK----KKKPTVLILMGVPGSYLVVTEHAYIGDLVKLAGGENVIKDQ------KVEYLASNTEYLQSANPDIILRAAHGMPAEV---VKMFDEEFKTNDIWKHFDAVKNNRVYD-LDENLFGMTASL-NAPEALKEMEKMLYDN |
| 3MWF Chain:A ((14-294)) | --------------------------TTEIKGKPKRVVTLYQGATDVAVSLGVKPVGAVESWTQKPKFEYIKNDLKDTKIVGQEPAPNLEEISKLKPDLIVASKVRNEKVYDQLSKIA-PTVSTD--TVFKFKDTTKLMGKALGKEKEAEDLLKKYDDKVAAFQKDAKAKYKDAWPLKASVVNFRADHTRIYAG-GYAGEILNDLGFKRNKDLQKQVDNGKDIIQLTSKESIPLMNADHIFVVKSDPNAKDAALVKKTESEWTSSKEWKNLDAVKNNQVSDDLDEITWNLAGGYKSSLKLIDDLYEKLNIE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MWF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72300 for 2184 contacts (-33.1/contact) +
2D Compatibility (PS) -28101 + (NN) -15696 + (LL) 3348
1D Compatibility (HY) -4000 + (ID) 2650
Total energy: -119399.0 ( -54.67 by residue)
QMean score : 0.507
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