Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVTLYTSPSCTSCRKARAWLEEHDIPYKERNIFSEPLSLDEIKEILRMTED-GTDEIISTRSKTFQKLNVDLDSLPLQQLFELIQKNPGLLRRPIIIDEKRLQVGYNEDEIRRFLPRRVRTYQLREAQKMVN
3F0I Chain:A ((5-119))
SVVIYHNPKCSKSRETLALLENQGIAPQVIKYLETSPSVEELKRLYQQLGLNEVRAMMRCKEELYKELNLGDSQLSDDALFAAMAEHPKLIERPIVVCNGQARHGRPPEQVLEIL-----------------
General information:
TITO was launched using:
RESULT:
Template:
3F0I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64529 for 864 contacts (-74.7/contact) +
2D Compatibility (PS) -12556 + (NN) -8131 + (LL) 1644
1D Compatibility (HY) -7600 + (ID) 1200
Total energy: -92372.0 ( -106.91 by residue)
QMean score : 0.640
(partial model without unconserved sides chains):
PDB file :
Tito_3F0I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F0I-query.scw
PDB file :
Tito_Scwrl_3F0I.pdb
: