Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------MSGIQWIKLSVNMFDDEKIKLLEKMPEGNQMLIVWIRLL--------ALAGKTNDKGRIYLNENV--PYTEDMLATLFNRDVGIIRVTLHTLQSFGMIQKTENG------LIEIENWEKHQNVDGMERVREQTRKRVEKHREAMRQN--------RIASGDSKGNKECNVTSSVTVTQSNAIDIDKELDKDINNNNS-DLNFKDFWEQNGFGMMLPVEL-EKLLAWVDDFAG-------------------------NREIVMKALEVTSEQGANKRNYAYV--------NKILKNWESRGFKTIADVDAAEKQR-QIELE------QKYNKPTYNKYNKPVKEEVLPDWFDKDQKQTKQETSTTGSSEDLEKQVAE--IKAQLAARNEVQA------------------------------------------- |
| 1HC7 Chain:A ((5-477)) | KGLTPQSQDFSEWYLEVIQKAELADYGPVRGTIVVRPYGYAIWENIQQVLDRMFKETGHQNAYFPLFIPMSFLFSPELAVVTHAGGEELEEPLAVRPTSETVIGYMWSKWIRSWRDLPQLLNQWGNVVRWEMRTRPFLRTSEFLWQEGHTAHATREEAEEEVRRMLSIYARLAREYAAIPVIEGLKTEKEKFAGAVYTTTIEALMKDGKALQAGTSHYLGENFARAFDIKFQDRDLQVKYVHTTSWGLSWRFIGAIIMTHGDDRGLVLPPRLAPIQVVIVPIYKDESRERVLEAAQGLRQALLAQGLRVHLDDRDQHTPGYKFHEWELKGVPFRVELGPKDLEGGQAVLASRLGGKETLPLAALPEALPGKLDAFHEELYRRALAFREDHTRKVDTYEAFKEAVQEGFALAFHCGDKACERLIQEETTATTRCVPFEAEPEEGFCVRCGRPSAYGKRVVFAKAY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HC7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 63132 for 2194 contacts (28.8/contact) +
2D Compatibility (PS) -34769 + (NN) -4134 + (LL) 0
1D Compatibility (HY) -1200 + (ID) 2150
Total energy: 20879.0 ( 9.52 by residue)
QMean score : ?
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