Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRKETIQFGAIIHGVGGTTDGWRHPDINPAASTDLDFYKTRAKIAEQGLFSFVFIADGLFISEKSIPHFLNRFEPITILSALAESTENIGLVGTFS-TSF-TEPFTLARQLSSLDHISSGRAGWNLVTSPQEGAARNHSKKNLPTHSDRYTIAAEHLKVVRGLWNSWEEDAFTYNKETGEFFNPEKLHHLNHQGEYFQVEGPLNIGRSKQGEPVVFQAGASSTGRDFAAQNAEAIFTHSDSLEEAV-EFYRDVKSRAEKAGRNADEVRIFPGISPIVADTLEEAEAKYTEFASLIPIENAVTYLARYFDDYDLSQFDLDAPFPDLGDIGKNAFQSTTDRIKKEAKERHLTLRQVATEAATPKTPFIGTKEQVADLIEVWFQNEAADGFII-AS--DIPGTFETFVEQVIPLLQSRGLYRNEYPATTLRGNLGLTIPQNKQAVETK |
| 1RHC Chain:A ((2-330)) | -----KTQIGYFASLEQ----------------YRPMDALEQAIRAEKVGFDSVWVDDHFHPWYHD---NAQSAQAWAWMGAALQATKKVFISTCITCPIMRYNPAIVAQTFATLRQMYPGRVGVAVGAGEAMNEVPVTGEW--PSVPVRQDMTVEAVKVMRMLWESD--------------------KPVTFKGDYFTLDKAFLYTKPDD-EVPLYFSGMGPKGAKLAGMYGDHLMTVAAAPSTLKNVTIPKFEEGAREAGKDPSKMEHAMLIWYSVDPDYDKAVEALRFWAGCLV-----PSMFK-YK-----VYDPK-E-----------VQLH---------ANLVHCDTIKEN-----YMCATDAEEMIKEIERFKE-AGINHFCLGNSSPDVNFGIDIF-KEVIPAVRD------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RHC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115394 for 2813 contacts (-41.0/contact) +
2D Compatibility (PS) -34721 + (NN) -8983 + (LL) 5192
1D Compatibility (HY) -13200 + (ID) 2600
Total energy: -169706.0 ( -60.33 by residue)
QMean score : 0.412
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