Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYRLLSIAFFGIAVICLLFPWMSSGIDAATFELVYEPAYKLIWMQPIIIVGYLGFLCTIFIPKFQRGKNRIVPFIGILILVLGLLNLAVRPLFGFDSFNFSIIDAYVSELVEPAFLIAVSASILSLIMYAIYLKKSENL
2NSC Chain:A ((1-109))
MEVKELERDKNRVVLEYVFG-------AEEIAQAEDKAVRYLNQR-------------VEIPGFRKGR---IPKNVLKMKLGEEFQEYTLDFLM-DLIPDTLKDRKLILSPIVTERELKDVT------ARVVVEVHEEP
General information:
TITO was launched using:
RESULT:
Template:
2NSC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86345 for 573 contacts (-150.7/contact) +
2D Compatibility (PS) -11235 + (NN) -521 + (LL) 2564
1D Compatibility (HY) 2800 + (ID) 650
Total energy: -93387.0 ( -162.98 by residue)
QMean score : 0.242
(partial model without unconserved sides chains):
PDB file :
Tito_2NSC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2NSC-query.scw
PDB file :
Tito_Scwrl_2NSC.pdb
: