Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGNGVQPLDPVAIQIGS----------ISVKW-YGVIIASAVVIALLLALSEANKRKMDKEIIVDLLIWAIP-----------ISIISARIYYVIFEWDFYKNNLGEIV--KIWHGGIAIYGALIGAVLTAIIFSRIKKISFWQLADVVAPSLII-----AQAIGRWGNFMNQEAHGAETTRSFLESLHLPDFIINQMYIDGAYYQ-----------------PTFLYESLWNVLGFVILLIIRRTKIRRGELFLG-----------------YVIWYSFGRFFIEGMRTDSLMWGDFRVSQALSLLLIVLSIGIIIYRRLKMNPPYYMEDKFGKVVKKK----------------------------------------------- |
| 1BCC Chain:C ((2-380)) | A-PNIRKSHPLLKMINNSLIDLPAPSNISAWWNFGSLLAVCLMTQILTGLLLAMHYTADTSLAFSSVAHTCRNVQYGWLIRNLHANGASFFFICIFLHIGRGLYYGSYLYKETWNTGVILLLTLMATAFVGYVLP-WGQMSFWGATVITNLFSAIPYIGHTLVEWAWGGF---SVDNPTLTRFFALHFLLPFAIAGITIIHLTFLHESGSNNPLGISSDSDKIPFHPYYSFKDILGLTLMLTPFLTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILR-SIPNKLGGVLALAASVLILFLIPFLHKSKQRTMTFRP--LSQTLFWLLVANLLILTWIGSQPVEHPFIIIGQMASLSYFTILLILFPTIGTLENKMLNY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BCC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145212 for 1832 contacts (-79.3/contact) +
2D Compatibility (PS) -27235 + (NN) 1411 + (LL) 336
1D Compatibility (HY) -13600 + (ID) 2450
Total energy: -186750.0 ( -101.94 by residue)
QMean score : 0.174
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