Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLGVIAAAIAVGLGALGAGIGNGLIVSKTVEGVARQPEARSMLQSIMFVGVALVEALPIIAVVIAFMVLNK
3V3C Chain:M ((8-73))
----VIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEDKIRGTLLLSLAFMEALTIYGLVVALALL--
General information:
TITO was launched using:
RESULT:
Template:
3V3C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33217 for 380 contacts (-87.4/contact) +
2D Compatibility (PS) -6585 + (NN) -547 + (LL) 168
1D Compatibility (HY) -7600 + (ID) 1450
Total energy: -49231.0 ( -129.56 by residue)
QMean score : 0.202
(partial model without unconserved sides chains):
PDB file :
Tito_3V3C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3V3C-query.scw
PDB file :
Tito_Scwrl_3V3C.pdb
: