Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKPYGVVIISHSKDVAKGVHDIIKEIAPDV-SITHAGGTEDGRIGTSFDAVNEAIEN-NEANKVYTFYDL--GSAKMNIETVEEIS----EKEIIL---FNAPILEGAYATAAQVQMDEKPEVIAANLKTIEIK
3IPR Chain:A ((1-107))
---MLGIVIATHG-ALSDGAKDAATVIMGATENIETVNLNSGDDVQALGGQIKTAIENVQQGDGVLVMVDLLSASPYNQAVLVINELEPALQKKIFVVSGTNLPMVLEAIN------------------------
General information:
TITO was launched using:
RESULT:
Template:
3IPR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64425 for 710 contacts (-90.7/contact) +
2D Compatibility (PS) -10315 + (NN) -2834 + (LL) 2988
1D Compatibility (HY) -4800 + (ID) 1100
Total energy: -80486.0 ( -113.36 by residue)
QMean score : 0.530
(partial model without unconserved sides chains):
PDB file :
Tito_3IPR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IPR-query.scw
PDB file :
Tito_Scwrl_3IPR.pdb
: