Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKLNEALKKAERIVFLTGAGVSVPSGIPDYRSKNGLYAGMSSPEYMLSHTCLVREPEKFYQFVTENMYYPNAVPNVIHKKMAEIETEKDV-TIITQNIDGLHEKAGSKKVVNFHGSLYHCYCQNCGMTVT----AKDYLKSDIH--TDCGG-VIRPDVVLYEEAISESAIDQSLTAIRKADLIVIVGTSFRVSPFCNLTDYRNKK--ARIFAVNKERISLPYPFEMMESDAVKVFEEI
1S7G Chain:E ((5-219))
IRKAAEILAKSKHAVVFTGAGISAESGIPTFRGEDGLWRKYD-PEEVASISGFKRNPRAFWEFSMEMKD--FAEPNPAHYAIAELERMGIVKAVITQNIDMLHQRAGSRRVLELHGSMDKLDCLDCHETYDWSEFVEDFNKGEIPRCRKCGSYYVKPRVVLFGEPLPQRTLFEAIEEAKHCDAFMVVGSSLVVYPAAELP-YIAKKAGAKMIIVNAE----------------------
General information:
TITO was launched using:
RESULT:
Template:
1S7G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107576 for 1588 contacts (-67.7/contact) +
2D Compatibility (PS) -22196 + (NN) -10215 + (LL) 1900
1D Compatibility (HY) -13200 + (ID) 3750
Total energy: -155037.0 ( -97.63 by residue)
QMean score : 0.598
(partial model without unconserved sides chains):
PDB file :
Tito_1S7G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S7G-query.scw
PDB file :
Tito_Scwrl_1S7G.pdb
: