Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSIKKSVIGFCLGAAALSMFACVDSSQSVMAAEKDKVEITWWAFPTFTQEKAKDGVGTYEKKVIKAFEKKNPNIKVKLETIDFT--SGPEKITTAIEA-GTAPDVLFDAPGRIIQYGKNGKLADLNDLFTDQ--FIKDVNNKNIIQASKSGDKAYMYPISSAPFYMAFNKKMLKDAGVLKLVKEGWTTSDFEKVLKALKNKGYTP-GSFFANGQGGD---QGPRAF--FANLYSAPITD-KEV-TKYTTDTKNSVKSMKKIVEWIKKGYLMNG-S-Q-YDGSADIQNFANGQTAFTILWAPAQPKTQAKLLESSKVDYLEVPFPSEDGK-PDLEYLVNGFAVFNNKDENKVKASKKFITFIADDKKWGPKDVIRTGAFPVRTSFGDL--Y-KGDKRMMKISKWTQYYSPYYNTIDGFSEMRTLWFPMVQSVSNGDEKPADALKDFTQKANDTIKKAAK |
| 1EU8 Chain:A ((2-407)) | ----------------------------------EEGKIVFAVGGAP-------NEIEYWKGVIAEFEKKYPGVTVELKRQATDTEQRRLDLVNALRGKSSDPDVFLMDVAWLGQFIASGWLEPLDDYVQKDNYDLSVFFQSVINLADKQGGKLYALPVYIDAGLLYYRKDLLEKYGYSK-PPE--TWQELVEMAQKIQSGERETNPNFWGFVWQGKQYEGLVCDFVEYVYSNGGSLGEFKDGKWVPTLNKPENVEALQFMVDLIHKYKISPPNTYTEMTEEPVRLMFQQGNAAFERNWPYAWGLHNADD-SPVKGKVGVAPLPHFPGHKSAATLGGWHIGISKY--SDNKALAWEFVKFVESYSVQ-KGFAMNLGWNPGRVDVYDDPAVVSKSPHLKELRAVFEN-AVPRPIVPYYPQLSEIIQKYVNSALAGKISPQEALDKAQKEAEELVKQ--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EU8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57950 for 3384 contacts (-17.1/contact) +
2D Compatibility (PS) -40850 + (NN) -10270 + (LL) 4096
1D Compatibility (HY) -11600 + (ID) 3400
Total energy: -119974.0 ( -35.45 by residue)
QMean score : 0.447
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