Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------MRIK--WFSL----VRITGLLLVLLYHFFKNSF----------------PGGFVGVDIFFTFSGFLITAL--------LIDEFSKTKKIDFV-------SFCRRRFYRIFPPLVLMVLVTIPFVFLVKS-----DFRASIGSQIMTALGFTSNFYEILTGGNYESQFIPHLFVHTWSLSIEVHF----YVLWGLTVWLLSKRSKDQKQL---RGTLFLISMGVFGVSFLTMFVRAFFVDNFSTIYFSTLSHIFPFFLGAMVATISGIREI--TGRFKK-NIKNLTLKHNLIMMGSAFAGLMIL--TFALDFDNRLTYLFGFVLSSIFASVMIYNARILHEHTPDISEPFVITYLADISYGMYLFHWPFYIIFSRLSPNWIAVILT-----------VVLSAVFSTL---------------SFYIIEPFILGRKPKFLDYEFDLLPY----------KKWLFSIGGVLTLITVVTMLTAPSIGSFETELLQNSLQQARTN--------TNRTHTLAAGDAGALSDVTVIGDSVALRSSAAFNKLLPEVQLDAAVSRNF---------SKSFDIFENRIQNKALSKIVVLAV-GVNSLDNYKTDLSQFIKSLPKGHRLIIVTPY-----------NAKNMSQVTTVRDYELSLMKKYN----YITVADWYKVATEHP-----------------EIWGNTDGVHYSDSDTTGADLYVSNVKKAIQKSAQRAAK------------------------------------------------------------ |
| 3WAJ Chain:A ((15-868)) | SVLVIAALISVKLRILNPWNSVFTWTVRLGGNDPWYYYRLIENTIHNFPHRIWFDPFTYYPYGSYTHFGPFLVYLGSIAGIIFSATSGESLRAVLAFIPAIGGVLAILPVYLLTREVFDKRAAVIAAFLIAIVPGQFLQRSILGFNDHHIWEAFWQVSALGTFLLAYNRWKGHDLTARQMAYPVIAGITIGLYVLSWGAGFIIAPIILAFMFFAFVLAGFVNADRKNLSLVAVVTFAVSALIYLPFAFNYPGFSTIFYSPFQLLVLLGSAVIAAAFYQIEKWNDVGFFERVGLGRKGMPLAVIVLTALIMGLFFVLTNAVLHFGA----LFFFGMAGILYSAYRFLKR---RSFPEMALLIWAIAMFIALWGQNRFAYYFAAVSAVYSALALSVVFDKLHFRVAFALLIALAAIYPTYILADAQSSYAGGPNKQWYDALTWMRENTPDGEKYDEYYLQLYPTPQSNKEPFSYPFETYGVISWWDYGHWIEAVAHRMPIANPFQAGIGNKYNNVPGASSFFTAENESYAEFVAEKLNVKYVVSD-IEMETGK-YYAMAVWAEGDLPLAEKYYGGYFYYSPTGTFGYANSQWDIPLNSIIIPLRIPSELYYSTMEAKLHLFDGSGLSHYRMIYESDYPAEWKSYSSQVNLNNESQVLQTALYEAVMRARYGVSPTMGTQEVLYKYAYTQLYEKKMGIPVKIAPSGYVKIFERVKGAVVTG--KVSANVTEVSVNATIKTNQNRTFEYWQTVEVKNGTYTVVLPYSHNSDYPVKPITPYHIKAGNVVKEITIYESQVQNGEIIQLDL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WAJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -353177 for 4458 contacts (-79.2/contact) +
2D Compatibility (PS) -58361 + (NN) 4160 + (LL) 856
1D Compatibility (HY) -35200 + (ID) 5550
Total energy: -447272.0 ( -100.33 by residue)
QMean score : 0.141
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