Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSTSFENKATNRGIITFTISQDEIKPALDQAFNKVKKDLNVPGFRKGHMPRTVFNQKFGEEALYENALNLVLPKAYEAAVAELGLDVVAQPKIDVVSMEKGQDWKLTAEVVTKPEVKLGDYKDLSVEVD-ASKEVSAEEVDAKVERERNNLAELTVKDGE-AAQGDTVVIDFVGSV-DGVEFDGGKGDNFSLELGSGQFIPGFEEQLVGSKAGQTVDVNVTFPEDYQAEDLAGKDAKFVTTIHEVKTKEVPALDDELAKDIDDEVETLDELKAKYRKELESAKEIAFDDAVEGAAIELAVANAEIVELPEEMVHDEVHRAMNEFMGNMQRQGISPEMYFQLTGTTEEDLHKQYQADADKRVKTNLVIEAIAAAEGFEATDEEIEKEITDLASEYNMEADQVRGLLSA-----DMLKHDIAMKKAVDVITSSATVK |
| 3GTY Chain:X ((1-408)) | MEVKELERDKNRVVLEYVFGAEEIAQAEDKAVRYLNQRVEIPG--KGRIPKNVLKMKLGE-EFQEYTLD-FLMDLIPDTLKDRK--LILSPIVTERE-LKDVTARVVVEVHEEPEVRIGDISKIEVEKVDEE-KVLEKYVERRIEDLRESHALLEPKE-GPAEAGDLVRVNMEVYNEEGKKL---TSREYEYVISEDEDRP-FVKDLVGKKKGDVVEIERE---------YEGKKYTYKLEVEEVYKRTLPEIGDELAKSVNNEFETLEQLKESLKKEGKEIYDVEMKESMREQLLEKLPEIVEI-EISDRTLEILVNEAINRLKREG-----RYEQIVS-SYESEEKFREELKERILDDIKRDRVIEVLAQEKGISVNDEELEKEAEELAPFWGISPDRAKSLVKARQDLREELRWAILKRKVLDLLLQEVKVK |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3GTY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -58966 for 2611 contacts (-22.6/contact) +
2D Compatibility (PS) -43506 + (NN) -17611 + (LL) 1264
1D Compatibility (HY) -23200 + (ID) 5100
Total energy: -147119.0 ( -56.35 by residue)
QMean score : 0.546
|
|
|