Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLFSEIFKFCISILWYFILTKNKGVVVMRAWKGIVLILSSIVVTLVAWQNAGLSEFVVPGLALTSLSLTFLLSTKFRILESYFQGIENMYFYHKVMAVFSMILLLLHKIGLGQGGHGSEFAKTIGSAGLYLFLSIVFVAYFGNFLKYEIWRFIHRFVYLVYILGLVHTFLILGDRILGNTLLSLIVLGYAVIGVISGFYIIFLYSRMRFRRVGYVQKVTHLNHDTTEIEIAMKR---PYRYDYGQFTFLKIYQAGFESAAHPFSISGGHD--RVIFLTVKAS-----------GDYTKSIYKQLKVGTKIALDRAYGHML--------FDK---DKKEQVWIAGGIGITPFISFIRENSIL----TKRVDFFYTFSNQDNLIYQDMLESYAKANP-NFKLHLNNSS----------LQGRLDFSQ---SVF--EGQPTIFMCGPTSMTSTYAK-VFRQKD-AKSRLVYEGFSFRDSWLSIFLLKTFDKVYSNLIK |
2CND Chain:A ((12-267)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RIHCRLVAKKELSRDVRLFRFSLPSPDQVLGLPIGKHIFVCATIEGK-LCMRAYTPTSMVDEIGHFDLLVKVYFKNEHPKFPNGGLMTQYLD-SLPVGSYIDVKGPLGHVEYTGRGSFVINGKQRNARRLAMICGGSGITPMYQIIQAVLRDQPEDHTEMHLVYANRTEDDILLRDELDRWAAEYPDRLKVWYVIDQVKRPEEGWKYSVGFVTEAVLREHVPEGGDDTLALACGPPPMIQFAISPNLEKMKYDMANSFVVF------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CND.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140108 for 1526 contacts (-91.8/contact) +
2D Compatibility (PS) -21801 + (NN) 1369 + (LL) 21816
1D Compatibility (HY) -9200 + (ID) 1950
Total energy: -149874.0 ( -98.21 by residue)
QMean score : 0.499
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