Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEISLLTDIGQRRSNNQDFINQFEN-----KAGVPLIILADGMGGHRAGNIASEMTVTDLGSDWAETDFS------ELSEIRDWMLVSIETENRKIYELGQSDDYKGMGTTIEAVAIVGDNIIFAHVGDSRIGIVRQGEYHLLTSDHSLVNELVKAGQLT------EEEAASHPQKNIITQSIGQANP-----VEPDLGVHL-LEEGDYLVVNSDGLTNMLSNADIATVLTQE----------KTLDDKNQDLITLANHRGGLDNITVALVYVESEAV |
| 3KDJ Chain:B ((11-307)) | --YGFTSICG-RRPEMEDAVSTIPRFLFDPQSAAHFFGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLSDGDTWLEKWKKALFNSFLRVDSEIESV----APETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAARIEAAGGKVIQWNGARVFGVLAMSRSIGDRYLKPSIIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEACEMARKRILLWHKKGKDPAAMSAAEYLSKLAIQRGSKDNISVVVVDLKPR-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KDJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -93498 for 2112 contacts (-44.3/contact) +
2D Compatibility (PS) -25731 + (NN) -9993 + (LL) 612
1D Compatibility (HY) -6000 + (ID) 2500
Total energy: -137110.0 ( -64.92 by residue)
QMean score : 0.370
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